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reads
9608
seqspec
831
regulatory_regions
414
variants_variants
184
alignments
56
contact matrix
40
variants
27
variants_regulatory_regions
27
sample sort parameters
26
coding_variants
25
See all 56 terms
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fastq
9608
yaml
831
bed
442
csv
211
tsv
91
bam
77
vcf
52
tar
22
cool
20
mcool
20
See all 21 terms
File Format Type
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bed3+
434
bed9+
3
mpra_starr
3
bed3
1
bed6
1
Assembly
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GRCh38
786
custom
61
GRCm39
17
mm10
1
Transcriptome Annotation
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GENCODE 43
1
GENCODE M32
1
GENCODE M33
1
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Illumina NextSeq 550
8059
Illumina HiSeq 2500
726
Illumina NextSeq 2000
312
Illumina NextSeq 500
212
Illumina NovaSeq 6000
150
Illumina MiSeq
138
ONT GridION X5
20
ONT PromethION 2 Solo
2
Status
released
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458
ID
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Alternate Accessions
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Content Summary
Content Type
External Identifiers
File Format
File Set
Illumina Read Type
Lab
Reference Files
Seqspec Of
Status
Transcriptome Annotation
Upload Status
UUID
/sequence-files/IGVFFI1165AJSO/
IGVFFI1165AJSO
reads
fastq
/measurement-sets/IGVFDS2192NCTH/
I2
/labs/jesse-engreitz/
released
validated
fffcd64e-af02-4675-8953-7352459ee06a
/sequence-files/IGVFFI2309FCAH/
IGVFFI2309FCAH
reads
fastq
/measurement-sets/IGVFDS4752FLON/
R2
/labs/jesse-engreitz/
released
validated
fff91008-85f6-46fd-b1f4-e229ed604af9
/sequence-files/IGVFFI6229GGKZ/
IGVFFI6229GGKZ
reads
fastq
/measurement-sets/IGVFDS7805IFYA/
R1
/labs/jesse-engreitz/
released
validated
fff7e798-aed9-4e37-9aac-39f558909a50
/sequence-files/IGVFFI9141IFTT/
IGVFFI9141IFTT
reads
fastq
/measurement-sets/IGVFDS8782KHRJ/
R1
/labs/jesse-engreitz/
released
validated
fff17eee-4c89-4717-a7ad-dab85b7d0b6f
/sequence-files/IGVFFI5295OHTL/
IGVFFI5295OHTL
reads
fastq
/auxiliary-sets/IGVFDS8929VNCP/
I1
/labs/jay-shendure/
released
validated
fff0dddf-1a6c-464d-9f5b-5df7100b12c3
/sequence-files/IGVFFI1792RKRX/
IGVFFI1792RKRX
reads
fastq
/measurement-sets/IGVFDS5477WNYP/
R1
/labs/jesse-engreitz/
released
validated
ffee1434-5746-47b2-8065-17136b8deaf4
/sequence-files/IGVFFI6599VIPD/
IGVFFI6599VIPD
reads
fastq
/measurement-sets/IGVFDS4825MNUM/
I2
/labs/jesse-engreitz/
released
validated
ffdfa0c8-dda0-4ae5-b637-b28249d96195
/sequence-files/IGVFFI7164IWPZ/
IGVFFI7164IWPZ
reads
fastq
/auxiliary-sets/IGVFDS8746LSXO/
R3
/labs/jay-shendure/
released
validated
ffd7f305-2d8e-40bd-acad-3b5f27754bb4
/sequence-files/IGVFFI8554OPUE/
IGVFFI8554OPUE
reads
fastq
/measurement-sets/IGVFDS2690TJJM/
R1
/labs/jesse-engreitz/
released
validated
ffd09fcb-94a9-415d-8970-34f7d0b16e39
/sequence-files/IGVFFI2796VWCV/
IGVFFI2796VWCV
reads
fastq
/measurement-sets/IGVFDS5795QOPU/
R2
/labs/jesse-engreitz/
released
validated
ffcc93a6-adc1-4bd2-a56c-e74f5ebf54f3
/configuration-files/IGVFFI7248KXML/
IGVFFI7248KXML
seqspec
yaml
/auxiliary-sets/IGVFDS8736DPTS/
/labs/jesse-engreitz/
/sequence-files/IGVFFI8964HZGC/
released
validated
ffcaefcc-07ac-4517-9540-6fa2f704464c
/sequence-files/IGVFFI1163QCXS/
IGVFFI1163QCXS
reads
fastq
/measurement-sets/IGVFDS7791SSYA/
I1
/labs/jesse-engreitz/
released
validated
ffb5665d-f42b-4ab6-90f0-0be6f049e19a
/sequence-files/IGVFFI7103JDWM/
IGVFFI7103JDWM
reads
fastq
/measurement-sets/IGVFDS7957LQTQ/
I2
/labs/jesse-engreitz/
released
validated
ffab9920-c697-4866-934b-4bad155d2998
/sequence-files/IGVFFI1089XLDA/
IGVFFI1089XLDA
reads
fastq
/measurement-sets/IGVFDS0022UYQK/
I1
/labs/jesse-engreitz/
released
validated
ffa16e26-0442-4a4d-b145-5dad40e4a7b8
/sequence-files/IGVFFI1956EMDR/
IGVFFI1956EMDR
reads
fastq
/measurement-sets/IGVFDS6252SSYB/
R2
/labs/jesse-engreitz/
released
validated
ff9d67a4-99e9-4236-bda3-159da459a374
/sequence-files/IGVFFI2908NAIM/
IGVFFI2908NAIM
reads
fastq
/auxiliary-sets/IGVFDS8386FNRJ/
R2
/labs/jay-shendure/
released
validated
ff8f27d2-547e-4bcf-922b-3174afb4815e
/sequence-files/IGVFFI1340BULZ/
IGVFFI1340BULZ
reads
fastq
/auxiliary-sets/IGVFDS4704IOZJ/
/labs/jesse-engreitz/
released
validated
ff8c0e26-151c-453a-8360-b604e35c9480
/configuration-files/IGVFFI0714MTNO/
IGVFFI0714MTNO
seqspec
yaml
/auxiliary-sets/IGVFDS4138DUVP/
/labs/jesse-engreitz/
/sequence-files/IGVFFI1411ZGTO/
released
validated
ff8224f0-3c0b-4d83-bc43-8c44f1bbd225
/configuration-files/IGVFFI8240YUYH/
IGVFFI8240YUYH
seqspec
yaml
/measurement-sets/IGVFDS6675BDQA/
/labs/jay-shendure/
/sequence-files/IGVFFI8821SFDV/
,
/sequence-files/IGVFFI4136YACE/
,
/sequence-files/IGVFFI0014UJDI/
,
/sequence-files/IGVFFI2437FQNY/
released
validated
ff7efee0-3506-47c6-ab77-3715545cdb8a
/sequence-files/IGVFFI3750JGII/
IGVFFI3750JGII
reads
fastq
/measurement-sets/IGVFDS6859ZHTQ/
R2
/labs/jesse-engreitz/
released
validated
ff7c7a43-09aa-4682-9b20-82b68566ef7a
/sequence-files/IGVFFI3469NFLH/
IGVFFI3469NFLH
reads
fastq
/auxiliary-sets/IGVFDS2452BXCK/
/labs/jesse-engreitz/
released
validated
ff7ada83-00bf-49e1-980f-224685fa2c10
/sequence-files/IGVFFI2905KIJB/
IGVFFI2905KIJB
reads
fastq
/measurement-sets/IGVFDS7791SSYA/
I2
/labs/jesse-engreitz/
released
validated
ff6fdcdb-63b2-41ea-99a4-d71f7015c61f
/configuration-files/IGVFFI5228SMZU/
IGVFFI5228SMZU
seqspec
yaml
/measurement-sets/IGVFDS2553TFCV/
/labs/ali-mortazavi/
/sequence-files/IGVFFI5241MPKQ/
,
/sequence-files/IGVFFI0800JAPD/
released
validated
ff6992f9-bd16-453a-8298-f575b2d6b58e
/configuration-files/IGVFFI8969XVTD/
IGVFFI8969XVTD
seqspec
yaml
/auxiliary-sets/IGVFDS2599ESDV/
/labs/jesse-engreitz/
/sequence-files/IGVFFI0721XHEB/
released
validated
ff690285-1e15-4f96-a483-76ca9d82b8c6
/sequence-files/IGVFFI5160NESU/
IGVFFI5160NESU
reads
fastq
/measurement-sets/IGVFDS0272VVTX/
I2
/labs/jay-shendure/
released
validated
ff5b9f4c-4b34-4c0f-9a82-d01e60d51ec3