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Content Type
File Format
File Format Type
Assembly
Transcriptome Annotation
Controlled Access
Data Use Limitation
File Size
Sequencing Platform
File Set Type
Preferred Assay Title
Assay
Annotated Cell Type
Taxa
Sample
Classification
Cellular Transformation Target
Disease
Modification
Treatment
Workflow
Uniformly Processed
Standardized Format
Library Type
Associated Phenotype
Construct Target Genes
Sample Integrated In
Sequencing Kit
Collections
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Audit Error
Audit Not Compliant
Externally Hosted
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25 Items
100 Items
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48003 items
1
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1921
ID
Accession
Alternate Accessions
Assembly
Content Summary
Content Type
External Identifiers
File Format
File Set
File Set @Type
Illumina Read Type
Lab
Reference Files
Seqspec Of
Status
Summary
Transcriptome Annotation
Upload Status
UUID
/sequence-files/IGVFFI4067OVRO/
IGVFFI4067OVRO
reads
fastq
/measurement-sets/IGVFDS2630GWQK/
MeasurementSet, FileSet, Item
I1
/labs/jesse-engreitz/
preview
I1 reads from sequencing run 1
validated
fffd6818-0b3a-4ca9-8ecb-116409891eb5
/sequence-files/IGVFFI1165AJSO/
IGVFFI1165AJSO
reads
fastq
/measurement-sets/IGVFDS2192NCTH/
MeasurementSet, FileSet, Item
I2
/labs/jesse-engreitz/
released
I2 reads from sequencing run 1
validated
fffcd64e-af02-4675-8953-7352459ee06a
/sequence-files/IGVFFI0251HKHB/
IGVFFI0251HKHB
reads
fastq
/measurement-sets/IGVFDS6970LSHB/
MeasurementSet, FileSet, Item
I1
/labs/jason-buenrostro/
released
I1 reads from sequencing run 1012
validated
fffcb6be-ec47-4790-8759-8636e5dca2ec
/sequence-files/IGVFFI5702NMGS/
IGVFFI5702NMGS
reads
fastq
/measurement-sets/IGVFDS0957VZJU/
MeasurementSet, FileSet, Item
I1
/labs/ryan-corces/
preview
I1 reads from sequencing run 1
validated
fffcb4f3-cb23-4ce0-9f42-5f682645ceac
/matrix-files/IGVFFI5092EVUK/
IGVFFI5092EVUK
cell by gene in sparse gene count matrix
sparse gene count matrix
tar
/analysis-sets/IGVFDS8973XVMZ/
AnalysisSet, FileSet, Item
/labs/ali-mortazavi/
/reference-files/IGVFFI9282QLXO/
,
/reference-files/IGVFFI9744VSJF/
released
cell by gene in sparse gene count matrix
validated
fffb8b1b-b1e2-475b-874a-d672c3387c1d
/sequence-files/IGVFFI4344XJCA/
IGVFFI4344XJCA
reads
fastq
/measurement-sets/IGVFDS6479GBTX/
MeasurementSet, FileSet, Item
R2
/labs/leif-ludwig/
preview
R2 reads from sequencing run 1
validated
fffa8b68-f3b7-4e90-9fff-941e4362b2b8
/sequence-files/IGVFFI5723DRHI/
IGVFFI5723DRHI
reads
fastq
/auxiliary-sets/IGVFDS8561MVXS/
AuxiliarySet, FileSet, Item
R1
/labs/ansuman-satpathy/
released
R1 reads from sequencing run 1
validated
fff94f52-8117-4233-a4c3-68f27ef9e17f
/sequence-files/IGVFFI2309FCAH/
IGVFFI2309FCAH
reads
fastq
/measurement-sets/IGVFDS4752FLON/
MeasurementSet, FileSet, Item
R2
/labs/jesse-engreitz/
released
R2 reads from sequencing run 1
validated
fff91008-85f6-46fd-b1f4-e229ed604af9
/sequence-files/IGVFFI5850YYGN/
IGVFFI5850YYGN
reads
fastq
/measurement-sets/IGVFDS4445ONRZ/
MeasurementSet, FileSet, Item
R2
/labs/jason-buenrostro/
released
R2 reads from sequencing run 4324
validated
fff8a1cc-082e-4235-b165-c6dfa0cce165
/sequence-files/IGVFFI6229GGKZ/
IGVFFI6229GGKZ
reads
fastq
/measurement-sets/IGVFDS7805IFYA/
MeasurementSet, FileSet, Item
R1
/labs/jesse-engreitz/
released
R1 reads from sequencing run 1
validated
fff7e798-aed9-4e37-9aac-39f558909a50
/sequence-files/IGVFFI1822OQDN/
IGVFFI1822OQDN
reads
fastq
/measurement-sets/IGVFDS4124BSHW/
MeasurementSet, FileSet, Item
R1
/labs/jason-buenrostro/
released
R1 reads from sequencing run 1084
validated
fff5f10a-0f8f-494d-929a-cda22fe070b0
/sequence-files/IGVFFI9141IFTT/
IGVFFI9141IFTT
reads
fastq
/measurement-sets/IGVFDS8782KHRJ/
MeasurementSet, FileSet, Item
R1
/labs/jesse-engreitz/
released
R1 reads from sequencing run 1
validated
fff17eee-4c89-4717-a7ad-dab85b7d0b6f
/sequence-files/IGVFFI5295OHTL/
IGVFFI5295OHTL
reads
SRA:SRR30585991
fastq
/auxiliary-sets/IGVFDS8929VNCP/
AuxiliarySet, FileSet, Item
I1
/labs/jay-shendure/
released
I1 reads from sequencing run 1
validated
fff0dddf-1a6c-464d-9f5b-5df7100b12c3
/sequence-files/IGVFFI9170ZKMQ/
IGVFFI9170ZKMQ
reads
fastq
/measurement-sets/IGVFDS4959DCXM/
MeasurementSet, FileSet, Item
R1
/labs/jesse-engreitz/
preview
R1 reads from sequencing run 1
validated
ffefb86d-8104-412e-9502-2a714c2162d4
/sequence-files/IGVFFI5567DOCL/
IGVFFI5567DOCL
reads
fastq
/measurement-sets/IGVFDS2684OSWL/
MeasurementSet, FileSet, Item
I1
/labs/ansuman-satpathy/
released
I1 reads from sequencing run 1
validated
ffee99b6-0176-4aca-812e-5321d1ddfbfd
/sequence-files/IGVFFI1792RKRX/
IGVFFI1792RKRX
reads
fastq
/measurement-sets/IGVFDS5477WNYP/
MeasurementSet, FileSet, Item
R1
/labs/jesse-engreitz/
released
R1 reads from sequencing run 1
validated
ffee1434-5746-47b2-8065-17136b8deaf4
/sequence-files/IGVFFI2011OWCK/
IGVFFI2011OWCK
reads
fastq
/measurement-sets/IGVFDS6758XUNF/
MeasurementSet, FileSet, Item
I1
/labs/ryan-corces/
preview
I1 reads from sequencing run 1
validated
ffeb4943-5a9f-4fef-8735-33e0f8e79e92
/sequence-files/IGVFFI0512DYNY/
IGVFFI0512DYNY
reads
fastq
/measurement-sets/IGVFDS7588UXOK/
MeasurementSet, FileSet, Item
R1
/labs/ryan-corces/
preview
R1 reads from sequencing run 2
validated
ffe860e0-3115-4be1-8557-7dd3fc1e88b9
/sequence-files/IGVFFI4256CQHO/
IGVFFI4256CQHO
reads
fastq
/measurement-sets/IGVFDS5295ONUY/
MeasurementSet, FileSet, Item
R2
/labs/jesse-engreitz/
preview
R2 reads from sequencing run 1
validated
ffe7a346-cf72-4483-a4d7-217afc54a8ca
/sequence-files/IGVFFI0414ILTR/
IGVFFI0414ILTR
reads
fastq
/measurement-sets/IGVFDS7493ZWMK/
MeasurementSet, FileSet, Item
I1
/labs/ryan-corces/
preview
I1 reads from sequencing run 1
validated
ffe79671-e262-43b4-a20d-345a0260dd82
/sequence-files/IGVFFI5536TZCG/
IGVFFI5536TZCG
reads
fastq
/measurement-sets/IGVFDS2695JODN/
MeasurementSet, FileSet, Item
R2
/labs/ryan-corces/
preview
R2 reads from sequencing run 1
validated
ffe580fd-b069-42b7-8c21-474cf02fcc12
/sequence-files/IGVFFI6623FYZW/
IGVFFI6623FYZW
reads
fastq
/measurement-sets/IGVFDS8398CKNT/
MeasurementSet, FileSet, Item
R2
/labs/ansuman-satpathy/
released
R2 reads from sequencing run 1
validated
ffe32c39-d250-4f0b-ab9e-4b82f1b7e07e
/configuration-files/IGVFFI0043GRDH/
IGVFFI0043GRDH
seqspec
yaml
/measurement-sets/IGVFDS1725LJAN/
MeasurementSet, FileSet, Item
/labs/ali-mortazavi/
/sequence-files/IGVFFI3555UMLA/
,
/sequence-files/IGVFFI2003XTIS/
released
seqspec of IGVFFI3555UMLA, IGVFFI2003XTIS
validated
ffe189e6-384b-4a48-aa7f-ac583672b261
/configuration-files/IGVFFI9858YEUZ/
IGVFFI9858YEUZ
seqspec
yaml
/measurement-sets/IGVFDS8553CHBZ/
MeasurementSet, FileSet, Item
/labs/ansuman-satpathy/
/sequence-files/IGVFFI1447EBOP/
,
/sequence-files/IGVFFI4191ALPR/
,
/sequence-files/IGVFFI7787TNYR/
,
/sequence-files/IGVFFI5693RHUR/
released
seqspec of IGVFFI1447EBOP, IGVFFI4191ALPR, IGVFFI7787TNYR, IGVFFI5693RHUR
validated
ffe0ba6f-b575-48c3-82a1-49d3db323505
/sequence-files/IGVFFI6599VIPD/
IGVFFI6599VIPD
reads
fastq
/measurement-sets/IGVFDS4825MNUM/
MeasurementSet, FileSet, Item
I2
/labs/jesse-engreitz/
released
I2 reads from sequencing run 1
validated
ffdfa0c8-dda0-4ae5-b637-b28249d96195