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Taxa
Classifications
Sample Term
Targeted Sample Term
607 items
MeasurementSet
IGVFDS6647HVMC
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
Jurkat cell line, male, Homo sapiens (sorting details: FACS bin for 11-20% expression of PPIF) modified with a guide library
released
MeasurementSet
IGVFDS4363PDBQ
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 0-25% expression of PPIF) modified with a guide library
released
MeasurementSet
IGVFDS2419JZMR
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting candidate cis-regulatory elements in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 76-100% expression of TLNRD1) modified with a guide library
released
MeasurementSet
IGVFDS4736IKQS
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
THP-1 cell line, male, Homo sapiens modified with a guide library
released
MeasurementSet
IGVFDS5041NPBP
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Jesse Engreitz, Stanford
Sample Summary
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin F for 80-100% expression of KITLG) modified with a guide library
released
MeasurementSet
IGVFDS5601DSMT
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 26-50% expression of PPIF) modified with a guide library
released
MeasurementSet
IGVFDS8710ZSOZ
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Jesse Engreitz, Stanford
Sample Summary
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin C for 35-45% expression of KITLG) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with a guide library
released
MeasurementSet
IGVFDS7147ANAC
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Jesse Engreitz, Stanford
Sample Summary
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin B for 10-20% expression of KITLG) modified with a guide library
released
MeasurementSet
IGVFDS0885VFHW
massively parallel reporter assay
Jay Shendure, UW
Sample Summary
mouse embryonic stem differentiated cell specimen induced to embryoid body for 14 days, male, Mus musculus WD44
released
MeasurementSet
IGVFDS3899ANMJ
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 90-100% expression of PPIF) modified with a guide library
released
MeasurementSet
IGVFDS5128CXIS
cas mediated mutagenesis (Variant FlowFISH)
Jesse Engreitz, Stanford
Sample Summary
THP-1 cell line, male, Homo sapiens
released
MeasurementSet
IGVFDS9738RCWL
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
Jurkat cell line, male, Homo sapiens (sorting details: FACS bin for 90-100% expression of PPIF) treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours, modified with a guide library
released
MeasurementSet
IGVFDS9880SAMJ
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 26-50% expression of PPIF) modified with a guide library
released
MeasurementSet
IGVFDS1261RWQY
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Jesse Engreitz, Stanford
Sample Summary
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin E for 80-90% expression of SSFA2) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with a guide library
released
MeasurementSet
IGVFDS1564ZVKC
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Jesse Engreitz, Stanford
Sample Summary
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin F for 80-100% expression of MYC) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with a guide library
released
MeasurementSet
IGVFDS5795QOPU
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 0-25% expression of PPIF) modified with a guide library
released
MeasurementSet
IGVFDS9690GCYG
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting sequence variants, transcription start sites in NOS3
Jesse Engreitz, Stanford
Sample Summary
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin D for 76-100% expression of NOS3) modified with a guide library
released
MeasurementSet
IGVFDS6884MESW
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
Jurkat cell line, male, Homo sapiens (sorting details: FACS bin for 35-45% expression of PPIF) treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours, modified with a guide library
released
MeasurementSet
IGVFDS6275PORW
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting sequence variants, transcription start sites in NOS3
Jesse Engreitz, Stanford
Sample Summary
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin C for 51-75% expression of NOS3) modified with a guide library
released
MeasurementSet
IGVFDS1298BFAZ
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Jesse Engreitz, Stanford
Sample Summary
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin A for 0-10% expression of MYC) modified with a guide library
released
MeasurementSet
IGVFDS3292ERTL
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 0-25% expression of PPIF) modified with a guide library
released
MeasurementSet
IGVFDS5488ZDOV
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
Jurkat cell line, male, Homo sapiens (sorting details: FACS bin for 0-10% expression of PPIF) modified with a guide library
released
MeasurementSet
IGVFDS9987GPMG
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Jesse Engreitz, Stanford
Sample Summary
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin A for 0-10% expression of SSFA2) modified with a guide library
released
MeasurementSet
IGVFDS5733FUWG
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
THP-1 cell line, male, Homo sapiens modified with a guide library
released
MeasurementSet
IGVFDS0563SROG
cas mediated mutagenesis (Variant FlowFISH) integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Jesse Engreitz, Stanford
Sample Summary
Jurkat cell line, male, Homo sapiens (sorting details: FACS bin for 0-10% expression of PPIF) modified with a guide library