IGVFDS4736IKQS

released
File Set Type
experimental data
Summary
prime editing Variant FlowFISH integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Assay Term
Sample Summaries
  • THP-1 cell line, male, Homo sapiens modified with a guide library
Construct Library Sets
  • IGVFDS2374NXLW Guide (sgRNA) library targeting sequence variants in a genomic locus
Protocols
Aliases
jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep4-FACS_Input_AmpliconSequencing

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with a guide library

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_THP1
male
Homo sapiens

Control File Sets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
prime editing Variant FlowFISH
  • jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-THP1-PE2_Exp1_NegControl_AmpliconSequencing
Jesse Engreitz, Stanford

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
principal analysis of Variant FlowFISH data
  • jesse-engreitz:PPIF_enhancer_tiling_THP1_Variant-FlowFISH_analysis
Jesse Engreitz, Stanford

Attribution