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IGVFDS4989HPTW

released
File Set Type
experimental data
Summary
cas mediated mutagenesis (Variant FlowFISH)
Assay Term
cas mediated mutagenesis
Sample Summaries
  • THP-1 cell line, male, Homo sapiens
Protocols
Aliases
jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-THP1-PE2_Exp1_NegControl_AmpliconSequencing

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_THP1
male
Homo sapiens

Sequencing Results (Illumina)

16 items
fastq
reads
R2
1
Illumina NextSeq 550
ATTCCTCT:TTGT
3.7 MB
Jesse Engreitz, Stanford
validated
fastq
reads
R1
1
Illumina NextSeq 550
AACAATGG:TTGT
3.1 MB
Jesse Engreitz, Stanford
validated
fastq
reads
I1
1
Illumina NextSeq 550
AACAATGG:TTGT
948 KB
Jesse Engreitz, Stanford
validated
fastq
reads
R2
1
Illumina NextSeq 550
AACAATGG:TTGT
3.8 MB
Jesse Engreitz, Stanford
validated
fastq
reads
I1
1
Illumina NextSeq 550
ATTCCTCT:TTGT
965 KB
Jesse Engreitz, Stanford
validated
fastq
reads
I1
1
Illumina NextSeq 550
CTAACTCG:TTGT
937 KB
Jesse Engreitz, Stanford
validated
fastq
reads
R1
1
Illumina NextSeq 550
ATTCCTCT:TTGT
3.1 MB
Jesse Engreitz, Stanford
validated
fastq
reads
R1
1
Illumina NextSeq 550
AGGTAAGG:TTGT
3.2 MB
Jesse Engreitz, Stanford
validated
fastq
reads
R2
1
Illumina NextSeq 550
CTAACTCG:TTGT
3.8 MB
Jesse Engreitz, Stanford
validated
fastq
reads
R2
1
Illumina NextSeq 550
AGGTAAGG:TTGT
3.9 MB
Jesse Engreitz, Stanford
validated

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford