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Jesse Engreitz

Stanford Center for Connecting DNA Variants to Function and Phenotype

Analysis of TLNRD1 CRIPSRi enhancer screen with FlowFISH in TeloHAEC

Jesse Engreitz, Stanford

TeloHAEC cell line, modified with CRISPR modifications, transfected with a guide library, sorted into bins

TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 76-100% expression of TLNRD1) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 51-75% expression of TLNRD1) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 0-25% expression of TLNRD1) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 26-50% expression of TLNRD1) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Ronghao Zhou

HG011972

Ian Whaling

jesse-engreitz

Anshul Kundaje

Marlene Rabinovitch

Lars Steinmetz

Michael Bassik

Thomas Quertermous

Will Greenleaf

gRNA sequencing for CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting candidate cis-regulatory elements in a genomic locus

Guide (sgRNA) library targeting candidate cis-regulatory elements in a genomic locus

CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting candidate cis-regulatory elements in a genomic locus

IGVFDS9053MHCS

Attribution

IGVFDS9053MHCS

Samples

Donors

MeasurementSet Input File Sets

AuxiliarySet Input File Sets

Attribution