IGVFDS9053MHCS

released
{
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    ],
    "assay_titles": [
        "CRISPR FlowFISH"
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            {
                "category": "NTR term ID",
                "detail": "Ontology term for [NTR_0000753](/sample-terms/NTR_0000753/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
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        ],
        "WARNING": [
            {
                "category": "missing files",
                "detail": "File set [IGVFDS9053MHCS](/analysis-sets/IGVFDS9053MHCS/) has no `files`. File sets are expected to have files.",
                "level": 40,
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            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
            "title": "Jesse Engreitz"
        },
        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
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    "control_for": [],
    "creation_timestamp": "2024-01-16T22:38:02.756733+00:00",
    "description": "Analysis of TLNRD1 CRIPSRi enhancer screen with FlowFISH in TeloHAEC",
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        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "release_timestamp": "2024-02-07T18:50:00.110075+00:00",
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                }
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        },
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        },
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            "taxa": "Homo sapiens"
        },
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            "taxa": "Homo sapiens"
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            "taxa": "Homo sapiens"
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                }
            ],
            "status": "released",
            "summary": "TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 76-100% expression of TLNRD1) modified with a guide library",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/in-vitro-systems/IGVFSM0599MHTG/",
            "@type": [
                "InVitroSystem",
                "Biosample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM0599MHTG",
            "aliases": [
                "jesse-engreitz:in-vitro-system_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_Rep4_bin1"
            ],
            "construct_library_sets": [
                "/construct-library-sets/IGVFDS7621RRLM/"
            ],
            "modifications": [
                "/modifications/2ba01755-df67-453b-b047-f7cdba236665/"
            ],
            "sample_terms": [
                {
                    "@id": "/sample-terms/NTR_0000753/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "aliases": [
                        "igvf:TeloHAEC"
                    ],
                    "status": "released",
                    "summary": "7dea6e79-1382-423a-aafe-14d84f355a81",
                    "term_name": "TeloHAEC"
                }
            ],
            "status": "released",
            "summary": "TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 0-25% expression of TLNRD1) modified with a guide library",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/in-vitro-systems/IGVFSM8115WXZU/",
            "@type": [
                "InVitroSystem",
                "Biosample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM8115WXZU",
            "aliases": [
                "jesse-engreitz:in-vitro-system_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_Rep4_bin2"
            ],
            "construct_library_sets": [
                "/construct-library-sets/IGVFDS7621RRLM/"
            ],
            "modifications": [
                "/modifications/2ba01755-df67-453b-b047-f7cdba236665/"
            ],
            "sample_terms": [
                {
                    "@id": "/sample-terms/NTR_0000753/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "aliases": [
                        "igvf:TeloHAEC"
                    ],
                    "status": "released",
                    "summary": "7dea6e79-1382-423a-aafe-14d84f355a81",
                    "term_name": "TeloHAEC"
                }
            ],
            "status": "released",
            "summary": "TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 26-50% expression of TLNRD1) modified with a guide library",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/in-vitro-systems/IGVFSM3508ZAFL/",
            "@type": [
                "InVitroSystem",
                "Biosample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM3508ZAFL",
            "aliases": [
                "jesse-engreitz:in-vitro-system_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_Rep4_bin3"
            ],
            "construct_library_sets": [
                "/construct-library-sets/IGVFDS7621RRLM/"
            ],
            "modifications": [
                "/modifications/2ba01755-df67-453b-b047-f7cdba236665/"
            ],
            "sample_terms": [
                {
                    "@id": "/sample-terms/NTR_0000753/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "aliases": [
                        "igvf:TeloHAEC"
                    ],
                    "status": "released",
                    "summary": "7dea6e79-1382-423a-aafe-14d84f355a81",
                    "term_name": "TeloHAEC"
                }
            ],
            "status": "released",
            "summary": "TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 51-75% expression of TLNRD1) modified with a guide library",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/in-vitro-systems/IGVFSM5826EWDE/",
            "@type": [
                "InVitroSystem",
                "Biosample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM5826EWDE",
            "aliases": [
                "jesse-engreitz:in-vitro-system_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_Rep4_bin4"
            ],
            "construct_library_sets": [
                "/construct-library-sets/IGVFDS7621RRLM/"
            ],
            "modifications": [
                "/modifications/2ba01755-df67-453b-b047-f7cdba236665/"
            ],
            "sample_terms": [
                {
                    "@id": "/sample-terms/NTR_0000753/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "aliases": [
                        "igvf:TeloHAEC"
                    ],
                    "status": "released",
                    "summary": "7dea6e79-1382-423a-aafe-14d84f355a81",
                    "term_name": "TeloHAEC"
                }
            ],
            "status": "released",
            "summary": "TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 76-100% expression of TLNRD1) modified with a guide library",
            "taxa": "Homo sapiens"
        }
    ],
    "schema_version": "6",
    "status": "released",
    "submitted_by": {
        "@id": "/users/4b2083b4-24c1-41d8-9daa-e79299f00d6e/",
        "title": "Ronghao Zhou"
    },
    "summary": "primary analysis of CRISPR FlowFISH data",
    "uuid": "c38ce05d-b4a3-4d3e-bf38-b9c8828ef22e"
}