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IGVFDS2108LFDU

released
File Set Type
experimental data
Summary
CRISPR interference screen (CRISPR FlowFISH) integrating a guide (sgRNA) library targeting candidate cis-regulatory elements in a genomic locus followed by DNA sequencing assay
Assay Term
CRISPR screen
Donors
Samples
Sample Summaries
  • TeloHAEC cell line, female, Homo sapiens (sorting details: FACS bin for 26-50% expression of TLNRD1) modified with a guide library
Construct Library Sets
  • IGVFDS7621RRLM Guide (sgRNA) library targeting candidate cis-regulatory elements in a genomic locus
Aliases
jesse-engreitz:measurement_set_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_Rep4_bin2

Assay Details

Protocols

Sequencing Results (Illumina)

1 item
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
fastq
reads
R1
1
Illumina NextSeq 550
80 MB
Jesse Engreitz, Stanford
validated

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford