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IGVFFI9643YRGK

released
validated
File Set
IGVFDS2340WJRV(functional effect prediction on scope of loci)
Summary
GRCh38 predictive unfiltered variant effects
Analysis Step Version
/analysis-step-versions/f177d6b8-48b1-4d58-af7c-5c50da2b0e25/
File Format
bed
Content Type
variant effects
Aliases
bill-majoros:bluestarr-k562-prediction-file-v0.1.1
md5sum
ee57169fb71a3c5c8060c0908abf6421
Content MD5sum
edfa5cfbcb9a8caa4c3dc00fa2841ed7
File Size
2.8 GB
Submitted File Name
/data/reddylab/btk20/IGVF_submissions/allpred.bed.gz
Checkfiles Version
v14
Attribution
Bill Majoros, Duke

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

1 item
Page
Description
Type
Download
Preview
File format specification of BlueSTARR
file format specification

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
virtual Homo sapiens (female) K562 cell line

Files This File Derives From

3 items
json
graph structure
Bill Majoros, Duke
13 KB
validated
hdf5
edge weights
Bill Majoros, Duke
63 MB
validated
bed
elements reference
External Lab, Community
16 MB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
bed
variant effects
GRCh38 predictive filtered variant effects
Bill Majoros, Duke
57 MB
validated