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IGVFDS2340WJRV

released
File Set Type
functional effect
Summary
functional effect prediction on scope of loci
Description
Predictions of mutation effect at every based in ENCODE cCREs across hg38, merged from 1064 chunks
Scope
loci
Large Scale Loci List
IGVFFI3932HEZL
Aliases
bill-majoros:bluestarr-k562-prediction-set-v0.1.1

Files

2 items
bed
variant effects
GRCh38 predictive filtered variant effects
Bill Majoros, Duke
57 MB
filtered
validated
bed
variant effects
GRCh38 predictive unfiltered variant effects
Bill Majoros, Duke
2.8 GB
validated

File Association Graph

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File Set
File
CuratedSet
ModelSet
PredictionSet

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
virtual K562 cell line, female, Homo sapiens

Input File Sets

2 items
ModelSet
BlueSTARR-K562 v0.1.1 neural network predicting regulatory elements
  • bill-majoros:bluestarr-k562-model-v0.1.1
Bill Majoros, Duke
CuratedSet
Homo sapiens GRCh38 elements
  • igvf:cCREs
ENCODE Project, NHGRI

Attribution

Award
HG011967
Principal Investigator(s)
Contact P.I.
Andrew Allen
Lab
Bill Majoros, Duke