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IGVFFI4455WXXM

released
validated
File Set
IGVFDS8141XEJE(CRISPR interference FlowFISH screen, Proliferation CRISPR interference screen targeting NFKBIA: guide quantifications)
Summary
guide quantifications
Analysis Step Version
/analysis-step-versions/c0fbe877-fa6c-423b-8d56-e600bf8e2859/
File Format
csv
Content Type
guide quantifications
Aliases
guillaume-lettre:BP_mageck_KRAB_flowfish_mapped_counts
md5sum
c38fbc3b953618778dbf9f5ece58f1e7
Content MD5sum
202efa09d323bc0c0053b83737def977
File Size
326 KB
Submitted File Name
/home/lokensin/projects/rrg-glettre/lokensin/IGVF/Submission_DACC_20250304/BP_Pilot_KRAB_flowfish_Mageck_count.txt.gz
Checkfiles Version
v17

Samples

32 items
Sample Terms
Summary
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 0-20% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 0-20% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 60-80% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 60-80% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 60-80% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library

Files This File Derives From

64 items
fastq
reads
Guillaume Lettre, MHI
177 MB
validated
fastq
reads
Guillaume Lettre, MHI
3.9 GB
validated
fastq
reads
Guillaume Lettre, MHI
656 MB
validated
fastq
reads
Guillaume Lettre, MHI
1.7 GB
validated
fastq
reads
Guillaume Lettre, MHI
2.6 GB
validated
fastq
reads
Guillaume Lettre, MHI
416 MB
validated
fastq
reads
Guillaume Lettre, MHI
1.0 GB
validated
fastq
reads
Guillaume Lettre, MHI
253 MB
validated
fastq
reads
Guillaume Lettre, MHI
3.9 GB
validated
fastq
reads
Guillaume Lettre, MHI
86 MB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
csv
guide quantifications
guide quantifications
Guillaume Lettre, MHI
132 KB
validated

Attribution

Award
HG012010
Principal Investigator(s)
Contact P.I.
Luca Pinello
Lab
Guillaume Lettre, MHI