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IGVFFI1080RSSU

released
validated
File Set
IGVFDS8141XEJE(CRISPR interference FlowFISH screen targeting NFKBIA integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure)
Summary
guide quantifications
Analysis Step Version
/analysis-step-versions/46ef0779-5c59-46d0-8832-076b589440da/
File Format
csv
Content Type
guide quantifications
Aliases
guillaume-lettre:BP_mageck_KRAB_flowfish_guide_scores
md5sum
c3c2136c662d4b7b1ee9a1eb8fa47fce
Content MD5sum
6083839c07cfac7f75d044243f5ae59e
File Size
132 KB
Submitted File Name
/home/lokensin/projects/rrg-glettre/lokensin/IGVF/Submission_DACC_20241113/BP_Pilot_KRAB_Flowfish_Mageck_results.csv.gz
Checkfiles Version
v14
Attribution
Guillaume Lettre, MHI

Samples

32 items
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 0-20% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 0-20% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 60-80% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 60-80% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) TeloHAEC cell line (sorting details: FACS 60-80% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
csv
guide quantifications
Guillaume Lettre, MHI
326 KB
validated