IGVFFI3449WZQF

released

validated

File Set

IGVFDS5128CXIS(untransfected prime editing Variant-EFFECTS)

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

jesse-engreitz:230523pPPIFEnformer-THP1-Amp_PPIF_promoter-THP1-PE2_Exp4_NegControl-PCRrep1_R1

md5sum

a7504c37c623fa05f4a99d6a0dd9bdaa

Content MD5sum

b41dff26e4ddb9864fcf7678c2e2df72

File Size

8.3 MB

Submitted File Name

230523pPPIFEnformerTHP1-THP1-PE-pPPIF_Enformer-Amp-pPPIF-BioRep1-FFRep1_BinNeg-PCRrep1_S401_R1_001.fastq.gz

Sequencing Details

Sequencing Platform

Illumina NextSeq 550

Sequencing Run

Illumina Read Type

Index

GTCTGATG:TTGT

Average Read Length

150

Read Count

244118

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM3211UEWZ

InVitroSystem

THP-1

THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)

Attribution

Award

HG011972

Principal Investigator(s)

Anshul Kundaje, Jesse Engreitz, Marlene Rabinovitch, Lars Steinmetz, Michael Bassik, Thomas Quertermous, Will Greenleaf

Contact P.I.

Jesse Engreitz

Lab

Jesse Engreitz, Stanford