IGVFFI3449WZQF

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI3449WZQF/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI3449WZQF",
    "aliases": [
        "jesse-engreitz:230523pPPIFEnformer-THP1-Amp_PPIF_promoter-THP1-PE2_Exp4_NegControl-PCRrep1_R1"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI3449WZQF](/sequence-files/IGVFFI3449WZQF/) has in progress subobject auxiliary set [IGVFDS3821IGRL](/auxiliary-sets/IGVFDS3821IGRL/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI3449WZQF/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "b41dff26e4ddb9864fcf7678c2e2df72",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-13T08:17:19.736198+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS3821IGRL/",
    "file_size": 8295522,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI3449WZQF/@@download/IGVFFI3449WZQF.fastq.gz",
    "illumina_read_type": "R1",
    "index": "GTCTGATG:TTGT",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 150,
    "md5sum": "a7504c37c623fa05f4a99d6a0dd9bdaa",
    "mean_read_length": 150,
    "minimum_read_length": 150,
    "read_count": 244118,
    "release_timestamp": "2023-12-21T01:23:20.657266+00:00",
    "s3_uri": "s3://igvf-files/2023/12/13/5c516c9a-0fe2-45f8-ad88-491f9d50864b/IGVFFI3449WZQF.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "230523pPPIFEnformerTHP1-THP1-PE-pPPIF_Enformer-Amp-pPPIF-BioRep1-FFRep1_BinNeg-PCRrep1_S401_R1_001.fastq.gz",
    "summary": "R1 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "5c516c9a-0fe2-45f8-ad88-491f9d50864b"
}