IGVFFI9930ZUUB

released

validated

File Set

IGVFDS5106XTZH(CRISPR knockout FACS screen targeting IL7R: fold change over control, guide quantifications)

Summary

custom assembly guide quantifications

Analysis Step Version

/analysis-step-versions/886b365e-3105-424a-8972-7476238b54d7/

File Format

csv

Content Type

guide quantifications

Aliases

charles-gersbach:cd8-tcells-guide-counts-crispr-ko-tfome

md5sum

5476df28b42297a12be0de03b764c966

Content MD5sum

fdcc12df11e04b90f7d30d842e4f5cbd

File Size

147 KB

Submitted File Name

/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/CRISPR.TFome.ko.without.BATF3.counts.table.csv.gz

Reference Source Details

Genome Assembly

custom

File Format Specifications

1 item

Page

Description

Type

Download

Preview

gRNA counts table

file format specification

gRNA counts table file format specification.pdf

Samples

4 items

Sample Terms

Summary

IGVFSM0466RHGQ

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 90-100% expression of IL7R) modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM2624KTRK

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL7R) modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM4936HKEW

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL7R) modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM7226CVDS

PrimaryCell

CD8-positive, alpha-beta memory T cell