IGVFFI8017PKLD

released

validated

File Set

IGVFDS8364HJHL(CRISPR knockout FACS screen targeting IL7R: fold change over control, guide quantifications)

Summary

custom assembly guide quantifications

Analysis Step Version

/analysis-step-versions/886b365e-3105-424a-8972-7476238b54d7/

File Format

csv

Content Type

guide quantifications

Aliases

charles-gersbach:cd8-tcells-guide-counts-crispr-ko-tfome-batf3-over

md5sum

991e6fbd68beba628929e274bdff2bc9

Content MD5sum

7a6cb5a0cb2a719548952c536c58a5ce

File Size

144 KB

Submitted File Name

/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/CRISPR.TFome.ko.with.BATF3.counts.table.csv.gz

Reference Source Details

Genome Assembly

custom

File Format Specifications

1 item

Page

Description

Type

Download

Preview

gRNA counts table

file format specification

gRNA counts table file format specification.pdf

Samples

4 items

Sample Terms

Summary

IGVFSM3895SURE

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL7R in cells overexpressing BATF3) modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM7158ADKU

PrimaryCell

CD8-positive, alpha-beta memory T cell

IGVFSM7887TFLH

PrimaryCell

CD8-positive, alpha-beta memory T cell

CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 90-100% expression of IL7R in cells overexpressing BATF3) modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM8084QKPW

PrimaryCell

CD8-positive, alpha-beta memory T cell