IGVFFI7472XTOL

released
validation exempted
File Set
IGVFDS8136ENRY(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf11_peaks_10x3
md5sum
ace95c33aab9d1a3376067f396a8dacb
Content MD5sum
7eb4cd206c7fc2eb56b9d5b324344c5e
File Size
2.0 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf11/e11l3_peaks.bed
Checkfiles Version
Validation Error Detail
{"md5sum": "original md5sum 7eb4cd206c7fc2eb56b9d5b324344c5e does not match newly calculated md5sum ace95c33aab9d1a3376067f396a8dacb.", "validate_files": "Error [file=/home/ubuntu/igvf-files/2025/01/28/eaa91d6c-4176-4fb3-aab8-2488dbb751d8/IGVFFI7472XTOL.bed.gz, line=236024]: chrom KI270728.1 not found [KI270728.1\t232274\t233170]\nAborting ... found error."}

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

4 items
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: H7-hESC differentiated cell specimen, female, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days, male, Homo sapiens; ... and 10 more samples
MultiplexedSample
multiplexed sample: H7-hESC differentiated cell specimen, female, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days, male, Homo sapiens; ... and 10 more samples
MultiplexedSample
multiplexed sample: H7-hESC differentiated cell specimen, female, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days, male, Homo sapiens; ... and 10 more samples
MultiplexedSample
multiplexed sample: H7-hESC differentiated cell specimen, female, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days, male, Homo sapiens; ... and 10 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
4.5 GB
validation exempted

Attribution