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IGVFFI5198JCCU

released
validated
File Set
IGVFDS9445RJOU(interference Perturb-seq: differential gene expression quantifications)
Summary
GRCh38 differential gene expression quantifications
Analysis Step Version
/analysis-step-versions/591f5c4d-08fe-4de1-a25a-d3aef0d39567/
File Format
tsv
Content Type
differential gene expression quantifications
Aliases
charles-gersbach:cd8-tcells-perturb-seq-10x-5prime-crispri-de-mast-results
md5sum
4ed46058b93373f4478936302a7c6a59
Content MD5sum
34586bccad8f0186da6a1fd2d47b0f4f
File Size
24 MB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/grna.de.crispri.umi_thres_4.aggr.txt.gz

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

3 items
Sample Terms
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)

Files This File Derives From

3 items
tar
filtered feature barcode matrix
Charles Gersbach, Duke
383 MB
validated
tar
filtered feature barcode matrix
Charles Gersbach, Duke
319 MB
validated
tar
filtered feature barcode matrix
Charles Gersbach, Duke
335 MB
validated

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke