IGVFFI5198JCCU

released
validated
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    "accession": "IGVFFI5198JCCU",
    "aliases": [
        "charles-gersbach:cd8-tcells-perturb-seq-10x-5prime-crispri-de-mast-results"
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    "analysis_step_version": "/analysis-step-versions/591f5c4d-08fe-4de1-a25a-d3aef0d39567/",
    "assay_titles": [
        "Perturb-seq"
    ],
    "assembly": "GRCh38",
    "audit": {},
    "award": {
        "@id": "/awards/HG012053/",
        "component": "functional characterization"
    },
    "barcode_map_for": [],
    "content_md5sum": "34586bccad8f0186da6a1fd2d47b0f4f",
    "content_type": "differential gene expression quantifications",
    "controlled_access": false,
    "creation_timestamp": "2024-10-01T15:05:23.923274+00:00",
    "derived_from": [
        "/matrix-files/IGVFFI0296HFSP/",
        "/matrix-files/IGVFFI0547WZWK/",
        "/matrix-files/IGVFFI7101DZKK/"
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        "file_set_type": "principal analysis",
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                "@id": "/primary-cells/IGVFSM5189UBOI/",
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                "sample_terms": [
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                        "@id": "/sample-terms/CL_0000909/",
                        "term_name": "CD8-positive, alpha-beta memory T cell"
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                ],
                "summary": "CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)",
                "taxa": "Homo sapiens"
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                ],
                "summary": "CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)",
                "taxa": "Homo sapiens"
            },
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                "@id": "/primary-cells/IGVFSM2747RJFY/",
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                "sample_terms": [
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                        "@id": "/sample-terms/CL_0000909/",
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                "summary": "CD8-positive, alpha-beta memory T cell, Homo sapiens modified with CRISPRi Sa-dCas9, transduced (lentivirus) with a guide library (MOI of 0.4)",
                "taxa": "Homo sapiens"
            }
        ],
        "summary": "interference Perturb-seq: differential gene expression quantifications"
    },
    "file_size": 24340032,
    "gene_list_for": [],
    "href": "/tabular-files/IGVFFI5198JCCU/@@download/IGVFFI5198JCCU.tsv.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/charles-gersbach/",
        "title": "Charles Gersbach, Duke"
    },
    "loci_list_for": [],
    "md5sum": "4ed46058b93373f4478936302a7c6a59",
    "release_timestamp": "2024-10-18T19:50:10.444404+00:00",
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    "schema_version": "13",
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    "submitted_by": {
        "@id": "/users/29f5f78d-ac90-421e-90c6-a90e1dc407a7/",
        "title": "Alejandro Barrera"
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    "submitted_file_name": "/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/grna.de.crispri.umi_thres_4.aggr.txt.gz",
    "summary": "GRCh38 differential gene expression quantifications",
    "upload_status": "validated",
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