Home

IGVFFI5029GJRL

released
validated
File Set
IGVFDS5153IDEO(single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq))
Summary
fragments
Analysis Step Version
/analysis-step-versions/e27a16d2-c700-405f-92c4-89efe1a558ce/
File Format
tsv
Content Type
fragments
Aliases
buenrostro-bernstein:surya-mouse-colitis-adenoma-tissue-atac-frag
md5sum
44053d4f235cc11b3f14cc92a497adc1
Content MD5sum
7b9c2675dbac096cc169849eb8e64bdf
File Size
4.0 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/processed-data/mouse_adenoma_tissue.ATAC.fragments.tsv.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

File Format Specifications

1 item
Page
Description
Type
Download
Standardized File Format
Preview
Specification of fragment file generated by https://github.com/masai1116/SHARE-seq-alignmentV2
file format specification

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6J colon tissue

Files This File Derives From

6 items
fastq
reads
Jason Buenrostro, Broad
20 GB
validated
fastq
reads
Jason Buenrostro, Broad
6.7 GB
validated
fastq
reads
Jason Buenrostro, Broad
20 GB
validated
fastq
reads
Jason Buenrostro, Broad
1.5 GB
validated
fastq
reads
Jason Buenrostro, Broad
6.7 GB
validated
fastq
reads
Jason Buenrostro, Broad
1.5 GB
validated