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IGVFFI4701TPMH

released
validated
File Set
IGVFDS2302NLIO(ATAC-seq: fold change over control, peak quantifications)
Summary
GRCh38 peak quantifications
Analysis Step Version
/analysis-step-versions/6eedb442-9e3c-4b7f-b666-6b983f47aa15/
File Format
tsv
Content Type
peak quantifications
Aliases
charles-gersbach:cd8-tcells-counts-atac-seq-acute-activation
md5sum
a986e69ced6c385e5f1e49055bcb5a28
Content MD5sum
c56244439060388b8015a81a65c9aa46
File Size
2.5 MB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/cd8_tcells.acute_activation_batf3.atacseq.counts.txt.gz

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

6 items
Sample Terms
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

Files This File Derives From

6 items
bam
alignments
Charles Gersbach, Duke
1.2 GB
validated
bam
alignments
Charles Gersbach, Duke
1.7 GB
validated
bam
alignments
Charles Gersbach, Duke
2.0 GB
validated
bam
alignments
Charles Gersbach, Duke
2.2 GB
validated
bam
alignments
Charles Gersbach, Duke
1.8 GB
validated
bam
alignments
Charles Gersbach, Duke
1.1 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fold change over control
GRCh38 fold change over control
Charles Gersbach, Duke
4.3 MB
validated

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke