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IGVFFI1533ZRUW

released
validation exempted
File Set
IGVFDS7527QIIX(single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
/analysis-step-versions/699d6738-4033-4afc-b6f3-1d82a80e0b41/
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf9_peaks_10x1
md5sum
bb12cd882054f2392601ec14c5681bca
Content MD5sum
ddbc1b834fe66b4f5df0a9d6dc38634f
File Size
1.7 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf9/e9l1_peaks.bed
Checkfiles Version
v14
Validation Error Detail
{"md5sum": "original md5sum ddbc1b834fe66b4f5df0a9d6dc38634f does not match newly calculated md5sum bb12cd882054f2392601ec14c5681bca.", "validate_files": "Error [file=/home/ubuntu/igvf-restricted-files/2025/01/28/92892833-b3a4-4018-9c9b-3925fe0ac66b/IGVFFI1533ZRUW.bed.gz, line=202917]: chrom KI270728.1 not found [KI270728.1\t232242\t233174]\nAborting ... found error."}
Attribution
Ansuman Satpathy, Stanford

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 1 day; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 5 days; ... and 5 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
6.3 GB
validation exempted