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IGVFFI1492BOLP

released
validated
File Set
IGVFDS3278AFYF(lentiMPRA: reporter experiment, reporter experiment barcode)
Summary
GRCh38 reporter experiment barcode
Analysis Step Version
/analysis-step-versions/c3ad4525-87d0-4d22-9410-f3e616d7cb9c/
File Format
tsv
Content Type
reporter experiment barcode
md5sum
cb280cf1d052812e5722ae8b71358957
Content MD5sum
ae48c952e11d06225d6caf15fa1e712b
File Size
246 MB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/mprasnakeflow/results/experiment/HepG2/reporter_experiment.barcode.HepG2.defaultAssignment.default.all.tsv.gz"
Checkfiles Version
v14
Submitter Comment
MPRAsnakeflow v0.3.0
Attribution
Nadav Ahituv, UCSF

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

1 item
Page
Description
Type
Download
Preview
IGVF MPRA reporter barcode experiment format
file format specification

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) HepG2 pooled cell specimen transduced (lentivirus) with a reporter library

Files This File Derives From

55 items
fastq
reads
Nadav Ahituv, UCSF
2.1 GB
validated
fastq
reads
Nadav Ahituv, UCSF
998 MB
validated
fastq
reads
Nadav Ahituv, UCSF
2.0 GB
validated
fastq
reads
Nadav Ahituv, UCSF
1.0 GB
validated
fastq
reads
Nadav Ahituv, UCSF
1.4 GB
validated
fastq
reads
Nadav Ahituv, UCSF
826 MB
validated
fastq
reads
Nadav Ahituv, UCSF
804 MB
validated
fastq
reads
Nadav Ahituv, UCSF
523 MB
validated
fastq
reads
Nadav Ahituv, UCSF
2.1 GB
validated
fastq
reads
Nadav Ahituv, UCSF
2.1 GB
validated