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IGVFFI1146PULR

released
validated
File Set
IGVFDS5536ZQMO(SHARE-seq: fragments, sparse gene count matrix)
Summary
fragments
Analysis Step Version
/analysis-step-versions/e27a16d2-c700-405f-92c4-89efe1a558ce/
File Format
tsv
Content Type
fragments
Aliases
buenrostro-bernstein:surya-mouse-colitis-organoid-atac-frag
md5sum
0350fc7e6f4260b8f617fade5fb14ba0
Content MD5sum
012b0ecdf047323475b2f101ebb4603c
File Size
2.3 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/processed-data/mouse_organoids.fragments.tsv.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

File Format Specifications

1 item
Page
Description
Type
Download
Preview
Specification of fragment file generated by https://github.com/masai1116/SHARE-seq-alignmentV2
file format specification

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Mus musculus C57BL/6J colonic epithelium organoid induced to colon for 27 days

Files This File Derives From

8 items
fastq
reads
Jason Buenrostro, Broad
4.3 GB
validated
fastq
reads
Jason Buenrostro, Broad
8.3 GB
validated
fastq
reads
Jason Buenrostro, Broad
2.0 GB
validated
fastq
reads
Jason Buenrostro, Broad
4.6 GB
validated
fastq
reads
Jason Buenrostro, Broad
2.3 GB
validated
fastq
reads
Jason Buenrostro, Broad
7.8 GB
validated
fastq
reads
Jason Buenrostro, Broad
4.0 GB
validated
fastq
reads
Jason Buenrostro, Broad
4.7 GB
validated