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IGVFFI0269NGAR

released
validation exempted
File Set
IGVFDS4816GMHG(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
/analysis-step-versions/699d6738-4033-4afc-b6f3-1d82a80e0b41/
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf6_peaks_10x2
md5sum
b3241e050bdb4d01a76ac91a5acb3dcd
Content MD5sum
5031cd2abd53cca314724790f5c82e66
File Size
2.4 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf6/e6l2_peaks.bed
Checkfiles Version
v14
Validation Error Detail
{"md5sum": "original md5sum 5031cd2abd53cca314724790f5c82e66 does not match newly calculated md5sum b3241e050bdb4d01a76ac91a5acb3dcd.", "validate_files": "Error [file=/home/ubuntu/igvf-files/2025/01/28/dcf546e4-5ae8-4dbe-b2a1-070bfaed6092/IGVFFI0269NGAR.bed.gz, line=294600]: chrom KI270728.1 not found [KI270728.1\t232280\t233180]\nAborting ... found error."}
Attribution
Ansuman Satpathy, Stanford

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days; Homo sapiens (male) H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days; ... and 6 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
6.6 GB
validation exempted