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IGVFFI9417TRDK

released
validated
File Set
IGVFDS1640HKDD(quantification DNA barcode sequencing for lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide)
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
md5sum
f3173a35d8a6339cfef060dd0edd387c
Content MD5sum
1884c51fd8defe03fca34e30273ac09f
File Size
815 MB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/ag-kircher/IGVF_data_submssion_TM/proximalPromotor/run3/dna_1_S1_R1_001.fastq.gz"
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
seqrun3
Attribution
Nadav Ahituv, UCSF

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
3
Sequencing Kit
NextSeq 500 High Output v2 Kit
Illumina Read Type
R1
Average Read Length
15
Read Count
48197448

Files Derived From This File

3 items
tsv
reporter experiment barcode
GRCh38 reporter experiment barcode
Nadav Ahituv, UCSF
246 MB
validated
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
20 MB
validated
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
19 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0134GNSM, IGVFFI4931RFSB, IGVFFI0535AWPM, IGVFFI5166MAAE, IGVFFI5993IFJO, IGVFFI5266KWUB, IGVFFI9417TRDK, IGVFFI4004PHAQ, IGVFFI2499MLDS
Nadav Ahituv, UCSF
1.6 KB
validation exempted