IGVFFI9391DBVT

released
validated
File Set
IGVFDS3899ANMJ(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:220228_8merInsertion-THP1-Amp_PPIF_promoter-BioRep3-FFrep3-BinF-PCRrep1_R2
md5sum
00845bc8f9acd468e026a33ecf1bb01a
Content MD5sum
a17517e2bfaa5181a4a3785310efdca9
File Size
15 MB
Submitted File Name
220426pPPIF_REPEAT-THP1-Gen8b-pPPIF-Amp_pPPIF-BioRep1-FFRep3-BinF-PCRrep1_S20_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
2
Illumina Read Type
R2
Index
CCAACATT:ACTG
Average Read Length
150
Read Count
335859

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 90-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution