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INDEXED
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SequenceFile
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IGVFFI8894RMLM
IGVFFI8894RMLM
released
validated
Json view
File Set
IGVFDS9477ARWI
(untransfected prime editing Variant-EFFECTS)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:220829_8merInsertion-Jurkat_NoStimulation-Amp_PPIF_promoter-Jurkat-PE2_Exp1_NegControl-PCRrep1_R1
md5sum
3673dc72bce999bd8894b180511c1bc8
Content MD5sum
06578411070d1eaa3b6413bf578b084e
File Size
7.6 MB
Submitted File Name
220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-NA-Amp_pPPIF_S1-BioRep1-FFRep1-BinNeg-PCRrep1_S169_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jesse Engreitz, Stanford
(
HG011972
—
Jesse Engreitz
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 550
Sequencing Run
1
Illumina Read Type
R1
Index
GACCTAAC:GTCA
Average Read Length
150
Read Count
410817
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4536EAJV
InVitroSystem
Jurkat
Homo sapiens (male) Jurkat cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)