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IGVFFI8354GVAX

released
validated
File Set
IGVFDS5674PNNL(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2536
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2536_R1
buenrostro-bernstein:SS-LS_2536_R1
md5sum
c9eda87e89a4db5875938b5886507858
Content MD5sum
4415e08349049ac82894ba716d99213c
File Size
947 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-12_L4_SS-PKR-1_SS-V2-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2536
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
48345064

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Homo sapiens (male, 37 years) bone marrow cell (cellular sub pool: SS-PKR 1)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated