IGVFDS5674PNNL

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (37 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 6
buenrostro-bernstein:scRNA Lib 6

Sequencing Results (Illumina)

16 items
fastq
reads
R2
1482
3.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2536
2.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2344
974 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1578
3.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1386
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1578
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1674
3.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1674
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1386
3.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2440
2.4 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (37 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1507
  • buenrostro-bernstein:Donor 1507
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad
1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 6
  • buenrostro-bernstein:scATAC Lib 6
Jason Buenrostro, Broad

Attribution