Home

IGVFFI7817JYCA

released
validated
File Set
IGVFDS3015HARC(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_113_atac_r3
md5sum
5d9bac404b841efa6db895ec8ea73a29
Content MD5sum
b711024c33a9f4ff482e64361e5cdf17
File Size
28 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230622_IGVF_Bridge_McGinnis/ATAC/ATAC_113_S4_L001_R3_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HV7LKDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
100
Read Count
507124937

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
left cerebral cortex tissue, male, Mus musculus C57BL/6J (10 weeks)

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1447PQPF, IGVFFI6947ZSMT, IGVFFI7817JYCA, IGVFFI5857WLSI
Ansuman Satpathy, Stanford
1.4 KB
validated

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford