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IGVFFI6922GMNK

released
validated
File Set
IGVFDS6123LRGF(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-APC-SHARE-02-5k-ATAC.R1.fastq.gz
md5sum
7f0d13fa892e77d3c9da5349e67192ca
Content MD5sum
a93bab951b5168cd4cf064090e905a56
File Size
1.5 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/APC-SHARE-02-5k-ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
APC-SHARE-02-5k_P1.86
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
29.98
Read Count
55045918

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6J colon tissue

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.0 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI6922GMNK, IGVFFI9369ACGK, IGVFFI5889UQOB
Jason Buenrostro, Broad
1.2 KB
validated