IGVFFI5860PVJQ

released

validated

File Set

IGVFDS5128CXIS(untransfected prime editing Variant-EFFECTS)

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

jesse-engreitz:230523pPPIFEnformer-THP1-Amp_PPIF_promoter-THP1-PE2_Exp4_NegControl-PCRrep1_R2

md5sum

68eeefc42bb1444919a0e8ec0a646768

Content MD5sum

4ea366b4fbbb92dca9aad2aae0e6c9c5

File Size

10.0 MB

Submitted File Name

230523pPPIFEnformerTHP1-THP1-PE-pPPIF_Enformer-Amp-pPPIF-BioRep1-FFRep1_BinNeg-PCRrep1_S401_R2_001.fastq.gz

Sequencing Details

Sequencing Platform

Illumina NextSeq 550

Sequencing Run

Illumina Read Type

Index

GTCTGATG:TTGT

Average Read Length

150

Read Count

244118

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM3211UEWZ

InVitroSystem

THP-1

THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)

Attribution

Award

HG011972

Principal Investigator(s)

Anshul Kundaje, Jesse Engreitz, Marlene Rabinovitch, Lars Steinmetz, Michael Bassik, Thomas Quertermous, Will Greenleaf

Contact P.I.

Jesse Engreitz

Lab

Jesse Engreitz, Stanford