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INDEXED
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SequenceFile
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IGVFFI5763USVR
IGVFFI5763USVR
released
validated
Json view
File Set
IGVFDS4989HPTW
(untransfected prime editing Variant-EFFECTS)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-THP1-PE2_Exp1_NegControl-PCRrep3_R2
md5sum
9680daa8d7f683b29199138189695346
Content MD5sum
c75e30e21c6b39d571c627a63d069ec7
File Size
3.8 MB
Submitted File Name
230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinNeg-PCRrep3_S403_R2_001.fastq.gz
Sequencing Details
Sequencing Platform
Illumina NextSeq 550
Sequencing Run
1
Illumina Read Type
R2
Index
CTAACTCG:TTGT
Average Read Length
150
Read Count
108868
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0894QRYX
InVitroSystem
THP-1
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)
Attribution
Award
HG011972
Principal Investigator(s)
Anshul Kundaje
,
Jesse Engreitz
,
Marlene Rabinovitch
,
Lars Steinmetz
,
Michael Bassik
,
Thomas Quertermous
,
Will Greenleaf
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford