Home

IGVFFI5559EVYB

released
validated
File Set
IGVFDS1085SCZI(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_115_atac_r1
md5sum
652f1f7644ccf58e41b13f5285cb14b2
Content MD5sum
e71435f3000f8a398d556e616c4f871f
File Size
17 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230622_IGVF_Bridge_McGinnis/ATAC/ATAC_115_S6_L001_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HV7LKDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
324794308

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6J (male, 10 weeks) left cerebral cortex tissue

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5706AEPS, IGVFFI1771YVVX, IGVFFI5559EVYB, IGVFFI1992CETB
Ansuman Satpathy, Stanford
1.4 KB
validated