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IGVFFI5559EVYB

released
validated
File Set
IGVFDS1085SCZI(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_115_atac_r1
md5sum
652f1f7644ccf58e41b13f5285cb14b2
Content MD5sum
e71435f3000f8a398d556e616c4f871f
File Size
17 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230622_IGVF_Bridge_McGinnis/ATAC/ATAC_115_S6_L001_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HV7LKDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
324794308

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
left cerebral cortex tissue, male, Mus musculus C57BL/6J (10 weeks)

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5706AEPS, IGVFFI1771YVVX, IGVFFI5559EVYB, IGVFFI1992CETB
Ansuman Satpathy, Stanford
1.4 KB
validated

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford