Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI3853SHJH
IGVFFI3853SHJH
released
validated
Json view
File Set
IGVFDS9519NBWN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7391
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7391_R1
md5sum
70582d80e486b0638059e790d60d70bb
Content MD5sum
2aa677ca72218c4221d6ce20676e73b4
File Size
5.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1949_L2_SS-PKR-500_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
7391
Flowcell ID
22KFLYLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
136660103
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6189KRRN
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 500)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4352WWYD
yaml
seqspec
seqspec of IGVFFI3853SHJH, IGVFFI9204ZDZC
Jason Buenrostro, Broad
1.3 KB
validated