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IGVFFI3626JLET

released
validated
File Set
IGVFDS6675BDQA(scATAC-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jay-shendure:scATAC_mEBs_rep1_day21_10XlaneB_R1
md5sum
8d8c9d73f4d7581fbee1973ffaa88433
Content MD5sum
fa5ab2a29057f81e0516cf3e834f607e
File Size
3.6 GB
Submitted File Name
/net/shendure/vol8/projects/JBL/GEO_scATAC_EB_correction_nobackup/scATAC_mEBs/scATAC_mEBs_d21_crispri_rep1_lane_b_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
1
Flowcell ID
H3JK7BGXG
Lane
1
Sequencing Kit
NextSeq 500/550 High-Output v2.5 Kit
Illumina Read Type
R1
Average Read Length
50
Read Count
105803579

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10XlaneB), male, Mus musculus WD44

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jay Shendure, UW
1.6 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI4139VQCR, IGVFFI7875UNHZ, IGVFFI3626JLET, IGVFFI9316OPTY
Jay Shendure, UW
854 B
validated

Attribution

Award
HG011966
Principal Investigator(s)
Contact P.I.
Jay Shendure
Lab
Jay Shendure, UW