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INDEXED
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SequenceFile
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IGVFFI3397RQUC
IGVFFI3397RQUC
released
validated
Json view
File Set
IGVFDS4803WKTQ
(Parse SPLiT-seq)
Summary
Nanopore reads from sequencing run 1
File Format
pod5
Content Type
Nanopore reads
Aliases
ali-mortazavi:igvfB01_13G-gc_lig-ss_11.pod5
md5sum
7c8c8a63a52f1dacf0e93cac94ac5c0f
File Size
1.1 TB
Submitted File Name
igvf_b01/nanopore_p2/igvfb01_13G-gc_lig-ss_11.pod5
Sequencing Details
Sequencing Platform
ONT PromethION 2 Solo
Sequencing Run
1
Flowcell ID
PAO05399
Sequencing Kit
ONT Ligation Sequencing Kit V14
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8722YQAW
MultiplexedSample
left cerebral cortex
multiplexed sample: left cerebral cortex tissue, female, Mus musculus CASTJ (72 days); left cerebral cortex tissue, male, Mus musculus B6J (72 days); ... and 6 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2224QAWI
fastq
reads
reads from sequencing run 1
Ali Mortazavi, UCI
83 GB
validated
Attribution
Award
HG012077
Principal Investigator(s)
Lior Pachter
,
Kim Green
,
Grant MacGregor
,
Ali Mortazavi
,
Barbara Wold
Contact P.I.
Ali Mortazavi
Lab
Ali Mortazavi, UCI