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INDEXED
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SequenceFile
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IGVFFI2724AGJB
IGVFFI2724AGJB
released
validated
Json view
File Set
IGVFDS5607LMEW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4383
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4383_R1
md5sum
4d42efdde21fcf8d5fb1ee42dd8dce41
Content MD5sum
6ba1e3398cf5e78cba87f1914362e2b8
File Size
3.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-555_L2_SS-PKR-207_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4383
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
51206148
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9310VRCN
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 207)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5892CRNB
yaml
seqspec
seqspec of IGVFFI2724AGJB, IGVFFI1042JCJG, IGVFFI3430XIVM
Jason Buenrostro, Broad
1.3 KB
validated