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INDEXED
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SequenceFile
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IGVFFI2581VJGU
IGVFFI2581VJGU
released
validated
Json view
File Set
IGVFDS4989HPTW
(untransfected prime editing Variant-EFFECTS)
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-THP1-PE2_Exp1_NegControl-PCRrep4_I1
md5sum
97e02f95c8c268ddfd8d9441de3619f2
Content MD5sum
14ac99b6a90c0e4da7511d3f98ed8b5f
File Size
965 KB
Submitted File Name
230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinNeg-PCRrep4_S404_I1_001.fastq.gz
Sequencing Details
Sequencing Platform
Illumina NextSeq 550
Sequencing Run
1
Illumina Read Type
I1
Index
ATTCCTCT:TTGT
Average Read Length
8
Read Count
107781
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0894QRYX
InVitroSystem
THP-1
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)
Attribution
Award
HG011972
Principal Investigator(s)
Anshul Kundaje
,
Jesse Engreitz
,
Marlene Rabinovitch
,
Lars Steinmetz
,
Michael Bassik
,
Thomas Quertermous
,
Will Greenleaf
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford