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INDEXED
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SequenceFile
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IGVFFI2232JXAS
IGVFFI2232JXAS
released
validated
Json view
File Set
IGVFDS8881TVYW
(ATAC-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-bulk-atac-chir4um-ipsc-cm-rep3-R2
md5sum
b97b64209dfb82642da8f33005d92745
Content MD5sum
13037038f270be5532a5ad7e4d0da91d
File Size
3.4 GB
Submitted File Name
/datacommons/gersbachlab/tda17/Anglen_7276_210923B6/data/atac_seq/processed_raw_reads/Anglen_7276_210923B6/CHRIR4uM_3.R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Charles Gersbach, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
51
Read Count
108947996
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5361EAGX
InVitroSystem
GM25256 (WTC-11)
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days treated with 4 μM GSK3 inhibition for 7 days
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4382XXOK
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
3.5 GB
validated