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INDEXED
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SequenceFile
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IGVFFI1787VTHF
IGVFFI1787VTHF
released
validated
Json view
File Set
IGVFDS4989HPTW
(untransfected prime editing Variant-EFFECTS)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-THP1-PE2_Exp1_NegControl-PCRrep2_R1
md5sum
4cd4e96044fac36da9764c15247cd945
Content MD5sum
041a9656f227f825f646effa3fbcd760
File Size
3.1 MB
Submitted File Name
230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep1-BinNeg-PCRrep2_S394_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jesse Engreitz, Stanford
(
HG011972
—
Jesse Engreitz
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 550
Sequencing Run
1
Illumina Read Type
R1
Index
AACAATGG:TTGT
Average Read Length
150
Read Count
108598
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0894QRYX
InVitroSystem
THP-1
Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)