IGVFFI1763VPAA

released
validated
File Set
IGVFDS0621CXBC(CRISPR HiCAR integrating a non-targeting guide (sgRNA) library)
Summary
R1 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-crispra-control-mouse-hl1-targeted-hicar-rep3-R1
md5sum
c3d89b4c1893773c15e8849b61f65bf9
Content MD5sum
9461d83f1c873669dcf5d96078697129
File Size
1.3 GB
Submitted File Name
/hpc/group/gersbachlab/tda17/IGVF_data_files/HiCAR/fastq/crispra_mouse/crispra_hicar_mouse_fastq/HL_1_TA432_NT_3_noET1_ds.5720bfa8bf024aa486b9e180878a5e08/HL_1_TA432_NT_3_noET1_S13_L001_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
4
Sequencing Kit
NextSeq 1000/2000 P2 Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
25436371

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
HL-1 cell line, female, Mus musculus C57BL/6J transfected with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
mcool
contact matrix
genomic position by genomic position in contact matrix
Charles Gersbach, Duke
57 MB
validated

Attribution