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IGVFFI1748SURF

released
validated
File Set
IGVFDS5674PNNL(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1386
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1386_R1
buenrostro-bernstein:SS-LS_1386_R1
md5sum
2ab4c58dd10a3a1149216e122af1f9a8
Content MD5sum
db0373de941df6172fb857cb3466d5d8
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1075_L1_SS-PKR-1_SS-V2-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1386
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
56563272

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (37 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad