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INDEXED
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SequenceFile
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IGVFFI0832CCKT
IGVFFI0832CCKT
released
validated
Json view
File Set
IGVFDS9477ARWI
(untransfected prime editing Variant-EFFECTS)
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:220829_8merInsertion-Jurkat_NoStimulation-Amp_PPIF_promoter-Jurkat-PE2_Exp1_NegControl-PCRrep1_I2
md5sum
e9c2237380de36dbd75157987e648d4d
Content MD5sum
846ea5371c90575a62da4a8c556ae372
File Size
3.2 MB
Submitted File Name
220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-NA-Amp_pPPIF_S1-BioRep1-FFRep1-BinNeg-PCRrep1_S169_I2_001.fastq.gz
Sequencing Details
Sequencing Platform
Illumina NextSeq 550
Sequencing Run
1
Illumina Read Type
I2
Index
GACCTAAC:GTCA
Average Read Length
4
Read Count
410817
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4536EAJV
InVitroSystem
Jurkat
Jurkat cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)
Attribution
Award
HG011972
Principal Investigator(s)
Anshul Kundaje
,
Jesse Engreitz
,
Marlene Rabinovitch
,
Lars Steinmetz
,
Michael Bassik
,
Thomas Quertermous
,
Will Greenleaf
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford