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IGVFFI0790CJXN

released
validated
File Set
IGVFDS4330PMAC(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
86a138cfc8b2a3a0ab4dbf615fb6711b
Content MD5sum
d644b2ce6af951d0c80b01a43a26a0de
File Size
6.3 GB
Submitted File Name
igvf_b01/next2/igvf_b01_B05_D_next_N2_R2.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAC2JNKHV
Lane
1
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
R2
Average Read Length
86
Read Count
142880513

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: left cerebral cortex tissue, female, Mus musculus CASTJ (72 days); left cerebral cortex tissue, male, Mus musculus B6J (72 days); ... and 6 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
407 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1093JAAG, IGVFFI0790CJXN
Ali Mortazavi, UCI
1.1 KB
validated

Attribution

Award
HG012077
Principal Investigator(s)
Contact P.I.
Ali Mortazavi
Lab
Ali Mortazavi, UCI