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IGVFFI0425XMWB

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validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7665VXNR(CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci)
Summary
R2 reads from sequencing run 5
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:sequence_file-teloHAEC_2kG_library-NovaSeq1-scRNAseq_2kG_2PMDox1_1_S1_L001_R2_001.fastq.gz
md5sum
631aeecd4c4fffc5aa6e8ed24e3c71f6
Content MD5sum
37c56a43fc4d311930683d7f7c4596e6
File Size
13 GB
Submitted File Name
/seq/landerlabCE/Users/Helen/TeloHAEC_Perturb-seq_2kG/240210_IGVF_recombined_fastqs/scRNAseq_2kG_2PMDox1_1_L001_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
60
Read Count
473904987

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
TeloHAEC cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford