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Content Type
File Format
File Format Type
Assembly
Controlled Access
File Set Type
Preferred Assay Title
Library Type
Associated Phenotype
Construct Target Genes
Taxa
Sample
Classification
Cellular Transformation Target
Disease
Modification
Treatment
Workflow
Uniformly Processed
Lab
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Status
Audit Not Compliant
Status
released
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329 items
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14
TabularFile
IGVFFI8225EESE
tsv - fragments
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
TabularFile
IGVFFI4074JRJB
csv - guide quantifications - custom
Charles Gersbach, Duke
File Set
CRISPR activation FACS screen targeting IL2RA: alignments, fold change over control, guide quantifications
released
validated
TabularFile
IGVFFI0462IJUO
tsv - bin paired count - GRCh38
Charles Gersbach, Duke
File Set
HiCAR: bin paired count, differential chromatin contact quantifications
released
validated
TabularFile
IGVFFI8017PKLD
csv - guide quantifications - custom
Charles Gersbach, Duke
File Set
CRISPR knockout FACS screen targeting IL7R: alignments, fold change over control, guide quantifications
released
validated
TabularFile
IGVFFI8092FZKL
tsv - elements reference - GRCh38
Jesse Engreitz, Stanford
File Set
Homo sapiens GRCh38 guide RNAs
released
validated
TabularFile
IGVFFI7693PBDH
tsv - guide RNA sequences - GRCm39
Charles Gersbach, Duke
File Set
Mus musculus GRCm39 guide RNAs
released
validated
TabularFile
IGVFFI0855DXJQ
tsv - fragments
Jason Buenrostro, Broad
File Set
SHARE-seq: fragments, sparse gene count matrix
released
validated
TabularFile
IGVFFI7138DMIL
tsv - cell hashing barcodes
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
TabularFile
IGVFFI8620CKHK
tsv - sample sort parameters
Jesse Engreitz, Stanford
File Set
cell sorting for mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 3 more measurement sets
released
validated
TabularFile
IGVFFI8020JTQX
tsv - fragments
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
TabularFile
IGVFFI2466HQBG
tsv - cell hashing barcodes
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
TabularFile
IGVFFI3412IJQJ
tsv - fragments
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
TabularFile
IGVFFI4750SIPG
tsv - fragments
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
TabularFile
IGVFFI3524CDMD
csv - guide quantifications
Guillaume Lettre, MHI
File Set
CRISPR base editing FlowFISH screen targeting NFKBIA: guide quantifications
released
validated
TabularFile
IGVFFI0929WRXO
tsv - element quantifications
Jay Shendure, UW
File Set
MPRA (scQer): element quantifications
released
validated
TabularFile
IGVFFI5952NKYY
tsv - cell hashing barcodes
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
TabularFile
IGVFFI3751JHPD
bed - peaks - GRCh38
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
TabularFile
IGVFFI7900YIDY
tsv - transcript quantifications - GRCh38
Charles Gersbach, Duke
File Set
knockout RNA-seq: fold change over control, transcript quantifications, transcriptome alignments
released
validated
TabularFile
IGVFFI3429KVCC
tsv - cell hashing barcodes
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
TabularFile
IGVFFI4651HMEA
tsv - barcode to element mapping
Nadav Ahituv, UCSF
File Set
lentiMPRA reporter library: barcode to element mapping
released
validated
TabularFile
IGVFFI6723VKSY
tsv - cell hashing barcodes
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
TabularFile
IGVFFI9129QCEU
bed - peaks - GRCh38
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
TabularFile
IGVFFI0965SWBT
tsv - fragments
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
TabularFile
IGVFFI5339CEMK
tsv - cell hashing barcodes
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
TabularFile
IGVFFI3092VBKJ
tsv - fragments
Ansuman Satpathy, Stanford
File Set
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted