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TabularFile
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Content Type
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sample sort parameters
26
fold change over control
15
guide RNA sequences
15
guide quantifications
8
bin paired count
6
differential chromatin contact quantifications
6
elements reference
5
sequence barcodes
4
transcript quantifications
4
peak quantifications
3
differential gene expression quantifications
2
element quantifications
2
MPRA sequence designs
1
barcode to element mapping
1
barcode to sample mapping
1
File Format
All
None
tsv
79
csv
19
bed
1
File Format Type
All
None
bed3
1
Status
released
25 Items
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300 Items
99 items
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4
TabularFile
IGVFFI4074JRJB
csv - guide quantifications - custom
Charles Gersbach, Duke
File Set
CRISPR activation FACS screen targeting IL2RA: fold change over control, guide quantifications
released
validated
TabularFile
IGVFFI0462IJUO
tsv - bin paired count - GRCh38
Charles Gersbach, Duke
File Set
HiCAR: bin paired count, differential chromatin contact quantifications
released
validated
TabularFile
IGVFFI8017PKLD
csv - guide quantifications - custom
Charles Gersbach, Duke
File Set
CRISPR knockout FACS screen targeting IL7R: fold change over control, guide quantifications
released
validated
TabularFile
IGVFFI8092FZKL
tsv - elements reference - GRCh38
Jesse Engreitz, Stanford
File Set
Homo sapiens GRCh38 guide RNAs
released
validated
TabularFile
IGVFFI7693PBDH
tsv - guide RNA sequences - GRCm39
Charles Gersbach, Duke
File Set
Mus musculus GRCm39 guide RNAs
released
validation exempted
TabularFile
IGVFFI8620CKHK
tsv - sample sort parameters
Jesse Engreitz, Stanford
File Set
cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
released
validated
TabularFile
IGVFFI7900YIDY
tsv - transcript quantifications - GRCh38
Charles Gersbach, Duke
File Set
knockout RNA-seq: fold change over control, transcript quantifications
released
validated
TabularFile
IGVFFI5198JCCU
tsv - differential gene expression quantifications - GRCh38
Charles Gersbach, Duke
File Set
interference Perturb-seq: differential gene expression quantifications
released
validated
TabularFile
IGVFFI0420XBKB
tsv - fold change over control - custom
Charles Gersbach, Duke
File Set
CRISPR interference FACS screen targeting CCR7: fold change over control, guide quantifications
released
validated
TabularFile
IGVFFI4762WUEH
tsv - peak quantifications - GRCh38
Charles Gersbach, Duke
File Set
ATAC-seq: fold change over control, peak quantifications
released
validated
TabularFile
IGVFFI7335KPIM
tsv - sample sort parameters
Jesse Engreitz, Stanford
File Set
cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
released
validated
TabularFile
IGVFFI4981YFMT
tsv - guide RNA sequences - GRCh38
Jesse Engreitz, Stanford
File Set
Homo sapiens GRCh38 guide RNAs
released
validated
TabularFile
IGVFFI8558XTCT
tsv - sample sort parameters
Jesse Engreitz, Stanford
File Set
cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
released
validated
TabularFile
IGVFFI4884FITS
tsv - fold change over control - GRCh38
Charles Gersbach, Duke
File Set
knockout RNA-seq: fold change over control, transcript quantifications
released
validated
TabularFile
IGVFFI5342EBSX
tsv - sample sort parameters
Jesse Engreitz, Stanford
File Set
cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
released
validated
TabularFile
IGVFFI3289WICA
csv - guide quantifications - custom
Charles Gersbach, Duke
File Set
CRISPR interference FACS screen targeting CCR7: fold change over control, guide quantifications
released
validated
TabularFile
IGVFFI9772EPNB
csv - differential chromatin contact quantifications - GRCh38
Charles Gersbach, Duke
File Set
HiCAR: bin paired count, differential chromatin contact quantifications
released
validated
TabularFile
IGVFFI0853SCNK
tsv - fold change over control - custom
Charles Gersbach, Duke
File Set
CRISPR activation FACS screen targeting IL2RA: fold change over control, guide quantifications
released
validated
TabularFile
IGVFFI7587TJLC
tsv - sequence barcodes
External Lab, Community
File Set
barcodes
released
validated
TabularFile
IGVFFI6830YLEK
tsv - differential gene expression quantifications - GRCh38
Charles Gersbach, Duke
File Set
activation Perturb-seq: differential gene expression quantifications
released
validated
TabularFile
IGVFFI0292XWJM
tsv - element quantifications
Jay Shendure, UW
File Set
MPRA: element quantifications
released
validated
TabularFile
IGVFFI8674KIMY
tsv - transcript quantifications - GRCh38
Charles Gersbach, Duke
File Set
RNA-seq: fold change over control, transcript quantifications
released
validated
TabularFile
IGVFFI0916QOTN
tsv - bin paired count - GRCh38
Charles Gersbach, Duke
File Set
HiCAR: bin paired count, differential chromatin contact quantifications
released
validated
TabularFile
IGVFFI6162WULK
tsv - sample sort parameters
Jesse Engreitz, Stanford
File Set
cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
released
validated
TabularFile
IGVFFI2410QRVN
tsv - element quantifications
Jay Shendure, UW
File Set
MPRA (scQer): element quantifications
released
validated