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File Set Type

4 items
  • intermediate
    AnalysisSet
    IGVFDS7944XZYE
    CRISPR knockout FACS screen targeting IL7R: alignments
    Charles Gersbach, Duke
    Samples
    CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library, sorted on expression of IL7R
    released
  • principal
    AnalysisSet
    IGVFDS8364HJHL
    CRISPR knockout FACS screen targeting IL7R: fold change over control, guide quantifications
    Charles Gersbach, Duke
    Samples
    CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library, sorted on expression of IL7R
    released
  • AuxiliarySet
    IGVFDS2606RJRX
    gRNA sequencing
    Charles Gersbach, Duke
    Summary
    gRNA sequencing for CRISPR knockout FACS screen integrating a guide (sgRNA) library targeting transcription start sites in many genes
    released
  • MeasurementSet
    IGVFDS3910ZTSZ
    CRISPR knockout FACS screen integrating a guide (sgRNA) library targeting transcription start sites in many genes
    Charles Gersbach, Duke
    Sample Summary
    CD8-positive, alpha-beta memory T cell, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL7R in cells overexpressing BATF3) modified with CRISPRko Sp-Cas9, transduced (lentivirus) with a guide library (MOI of 0.4)
    released