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Document Type

Characterization Method

37 items
UCI/Caltech IGVF dataset pipeline report for ali-mortazavi:IGVF_B01_subpool_6
plate map
released
ffc29f91-a54b-4cd0-8aed-e1c841ac2a41
  • charles-gersbach:AIO-hUBC-dSaCas9-2xVP64-2A-Thy1_1-plasmid-map
AIO-hUBC-dSaCas9-2xVP64-2A-Thy1.1 Map
plasmid map
released
ee0564e2-3d03-4c94-bcb3-39d2bbd2d588
  • jay-shendure:scQers_vector_pdf
Plasmid map for scQers vector pdf format
plasmid map
released
e90669ea-1311-43b1-952b-fc863c7898a5
UCI/Caltech IGVF dataset pipeline report for ali-mortazavi:IGVF_B01_subpool_2
plate map
released
de85427c-cb62-494e-8213-ef82cd71bfb7
  • jesse-engreitz:Addgene_TRE-KRAB-dCas9-IRES-BFP
Addgene Plasmid Map TRE-KRAB-dCas9-IRES-BFP
plasmid map
released
d8ce793f-933b-45ea-9611-1c3f80cb7e11
Generation of HCT116-RAD21-mAID-mClover
experimental protocol
released
d2f1ed4f-d62a-471b-9e76-d5d8c77b072e
  • charles-gersbach:seurat-find-markers-mast-file-format
seurat FindMarkers mast results
file format specification
released
d298419c-50d3-43fc-97c0-e676fe182a27
  • charles-gersbach:hUBC-eGFP-BATF3-plasmid-map
hUBC 2A eGFP BATF3 Map
plasmid map
released
d25518aa-6bcb-43ce-a2f0-8d16f513ff0a
  • charles-gersbach:gene-counts-table-file-format
Gene counts table
file format specification
released
c79b81ec-d6e9-41e1-9417-519552cb64ce
UCI/Caltech IGVF dataset pipeline report for ali-mortazavi:IGVF_B01_subpool_7
plate map
released
c36e57a7-52c1-4dd1-a88b-c25655b3f216
Generation of inducible CRISPRi line
plasmid map
released
b0663905-6249-42ea-9937-9b2f645c787d
  • jay-shendure:NeuronDifferentiationProtocol
method for differentiating neurons from iPSCs
cell fate change protocol
released
a9ab6aae-48a0-444a-a609-3addf65d3027
  • charles-gersbach:counts-in-peaks-table-atac-seq-file-format
ATAC-seq counts in peaks table
file format specification
released
a6030aeb-ca7d-4d08-9d55-d459b32b441c
Generation of inducible CRISPRi line
plasmid map
released
a1a19741-90cc-46ea-b90c-96c4a4b70d8e
  • jesse-engreitz:document_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_plasmid_sequence
sgOpti-blast gRNA plasmid sequence
plasmid map
released
a1610beb-0637-4d13-b2ef-def0c3afaca2
UCI/Caltech IGVF dataset pipeline report for ali-mortazavi:IGVF_B01_subpool_3
plate map
released
98e6116c-c0ab-463d-83db-7647711b131f
  • charles-gersbach:gRNA-counts-table-file-format
gRNA counts table
file format specification
released
7f185ed1-f80f-470c-9a5f-50fdd114d9a6
UCI/Caltech IGVF dataset pipeline report for ali-mortazavi:IGVF_B01_subpool_4
plate map
released
7c9b9828-5097-48cc-942c-e000579e7de4
  • jay-shendure:scCRISPRa_Piggybac_expression_vector
Plasmid map for scCRISPRa Piggybac expression vector
plasmid map
released
78f1cb67-1051-407c-9953-ba2c39ada2ae
overview of experimental design
experimental protocol
released
74d53b9c-ab1d-42e3-b679-d3a00ae3d842
Guide plasmid for TAP-seq
plasmid map
released
6f05cff9-a97a-45f7-9503-ebd5c44873b0
  • charles-gersbach:hUBC-eGFP-plasmid-map
hUBC 2A eGFP Map
plasmid map
released
65286f64-0a07-4805-8e75-61f4aac107ab
  • charles-gersbach:saCas9-lib-hUBC-Thy1_1-plasmid-map
saCas9-lib hUBC-Thy1.1 Map
plasmid map
released
59f49737-feb9-43b5-99e3-0828577c240a
Guide plasmid for CRISPRi-FF
plasmid map
released
4b4305ce-5844-4b84-a3c7-263a1040b050
UCI/Caltech IGVF dataset pipeline report for ali-mortazavi:IGVF_B01_LeftCortex
plate map
released
49860adc-0f7d-4373-85dc-52604fcbbb1a